First ensure that the CVSROOT and CVS_RSH
environment variables have been set
setenv CVSROOT ':ext:cvs@vnfe4.physics.ubc.ca:/home2/cvs'
(it is recommended that you insert the above in your ~/.cshrc).
setenv CVS_RSH '/usr/bin/ssh'
Now cd to some convenient working directory and check out the pamr distribution
% cvs co pamr cvs server: Updating pamr U pamr/.laliases U pamr/KNOWN_ISSUES . . . U pamr/test/Makefile.in U pamr/test/test1.c cvs server: Updating pamr/waveWait for batch job to finish.
Once the check-out is complete, change to the pamr directory, and build the distribution.
Note that parts of the package are still under development, so you can currently expect
to see a lot of error messages which you can safely ignore.
% cd pamr % source ~matt/scripts/soINTEL-myr-ompi % configure --prefix=`pwd` creating cache ./config.cache checking for Unix flavour... LINUX checking for gcc... . . creating amrd/Makefile creating examples/wave/Makefile creating doc/Makefile % make echo; echo "Making in src test amrd examples/wave doc" Making in src test amrd examples/wave doc for f in src test amrd examples/wave doc; do \ . . . ls -lt Wiley_chapter.ps
-rw-r--r-- 1 matt choptuik 11844 Aug 15 14:51 Wiley_chapter.ps
make[1]: Leaving directory ...
% cd examples/wave % cp ~matt/templates/pamr-wave-myr-openmpi.pbs . % qsub pamr-wave-myr-openmpi.pbs
% cd run_2d % ls *sdf wave_2d_L0_phi_tl2_0.sdf wave_2d_L0_phi_tl2_2.sdf wave_2d_L0_phi_tl2_1.sdf wave_2d_L0_phi_tl2_3.sdf % sdftodv *sdfThen select Merge All Registers in DV, enable AMR in the Options panel, and visualize the results.